Anonymous

Changes

Pharmacotyper

162 bytes added, 13:13, 27 February 2019
Pharmacotyper latest version
===Pharmacotyper latest version===
The current version of Pharmacotyper is based on published tools (working on BAM files) in a Singularity container, and pending introduction in our [[Bioinformatic pipeline]].
; HLA typing
; ADME typing
: For other genes we use [https://github.com/inumanag/aldy Aldy]
 
Note that neither Aldy nor xHLA are free software, and it remains to figure out the permissions to use the methods in a clinical setting.
===Pharmacotyper legacy version===