User contributions
27 February 2019
Pharmacotyper
Pharmacotyper - getting relevant PGx variants from a patient VCF
+327
Pharmacoracle
no edit summary
-2
Pharmacoracle
Pharmacoracle - a REST API based on the OWLAPI
-462
Bioinformatic pipeline
Created page with "==Outline== * Integrate pharmacogenomic variant calling in the hospital bioinformatic workflow using [https://www.nextflow.io/ Nextflow] * Packaging the pharmacogenomic varian..."
Main Page
Sub-tasks for PGx at Oslo University Hospital
+63
Allele definition
Which definition should we stick to?
+187
Allele definition
How to define PGx alleles for next generation sequencing
+320
Allele definition
Chosing the correct variants to include in the PGx alleles
+407
Allele definition
Chosing an appropriate genomic reference build
-26
Allele definition
How to obtain PGx allele definitions from literature
+388
Main Page
Sub-tasks for PGx at Oslo University Hospital
+116
NGS
Challenges
+256
16 November 2018
2 November 2018
9 October 2018
8 October 2018
21 September 2018
WebProtege
no edit summary
+90
WebProtege
no edit summary
+10
WebProtege
no edit summary
+711
File:WebProtege download owl ontology.png
no edit summary
WebProtege
no edit summary
+9
WebProtege
User interface of Pharmacoracle's WebProtégé
+19
WebProtege
Try the Pharmacoracle WebProtégé yourself
+9
WebProtege
no edit summary
+241
WebProtege
Curation of the Recommendation
-51
WebProtege
Curation of the Recommendation
+63
WebProtege
no edit summary
-2
20 September 2018
Pharmacoracle
Hints on how to use it (see also example section below)
+98
WebProtege
no edit summary
+93
WebProtege
Using Desktop Protégé for curation of PGx recommendations
-3
WebProtege
Using WebProtégé for curation of PGx recommendations
+32
WebProtege
User interface of Pharmacoracle's WebProtégé
+97
WebProtege
User interface of Pharmacoracle's WebProtégé
WebProtege
User interface of Pharmacoracle's WebProtégé
-1
WebProtege
no edit summary
+882
File:Protege compare guideline structure.png
no edit summary
WebProtege
Using WebProtégé for curation of PGx recommendations
+1
WebProtege
Using WebProtégé for curation of PGx recommendations
+237
File:WebProtege user interface guideline language.png
no edit summary
WebProtege
Using WebProtégé for curation of PGx recommendations
+1,688
File:WebProtege user interface phen.png
no edit summary
WebProtege
Using WebProtégé for curation of PGx recommendations
+409
File:WebProtege user interface func status discussion.png
no edit summary
WebProtege
no edit summary
+1,138
File:WebProtege user interface func status.png
no edit summary
WebProtege
User interface of Pharmacoracle's WebProtégé
+1,029
File:WebProtege choose view and arrow lowres.png
no edit summary
WebProtege
no edit summary
+1